My suggestion to "fix" that would be to change the cross hair system around. You can keep things skill based, and avoid pinpoint damage issues from heavy alpha strikes.
For instance here is what the Hunchback 4Ps cross hairs could look like.
That would keep the weapons from being pinpoint, without the random number generator frustration. Each torso based weapon or weapon grouping could have its own cross hair. Nothing too extreme, but enough to spread the damage around. People can keep alpha boats, but they aren't quite as devastating.
Edit: Format. Zyllos totally beat me to this idea. Not sure how I missed that post. Same idea with a bunch more detail. Check it out. http://mwomercs.com/...38#entry2115438
Edited by Brilig, 29 March 2013 - 10:03 PM.
Changed answer three to Abstain